Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880278.1_cds_XP_016437444.1_33204
CDS Infomation

[gene=LOC107763474] [db_xref=GeneID:107763474] [protein=probable methyltransferase PMT9 isoform X2] [protein_id=XP_016437444.1] [location=join(3321..3326,3439..3603,3785..3967,4056..4650,4925..5037,5152..5372,6814..7126)] [gbkey=CDS]
Sequence

ATGCATGTTTGTGATACAAGGTATTCAGAGTTGATACCTTGCCTTGACAGAAATTTGATA
TATCAATTGAGATTGAGGCTTAATTTGACTGTTATGGAGCATTATGAGAGGCATTGTCCC
CCTCCTCAACGTCGTTACAACTGTCTTATCCCCCCTCCAGCTGGTTACAAGATTCCAATT
AGATGGCCAGCTAGTAGAGACCAAGTGTGGAAAGCAAACATACCCCATACACATCTTGCA
CAGGAAAAGTCGGACCAAAATTGGATGGTTGTCGATGGAGACAAAATAAAATTCCCTGGT
GGAGGAACACATTTCCATTATGGAGCGGACAAATACATTGCAGCAATTGCAGGGATGCTC
AAATTTCCTGGTGAAAAACTTAGCAATGGCGGAAACATACGAAATGTTCTTGACGTTGGC
TGTGGTGTTGCGAGCTTTGGAGCATATCTTCTTTCCCATGATATTATAGCTATGTCGCTT
GCTCCTAATGACGTGCACGAGAATCAAATACAGTTTGCATTAGAAAGGGGAATCCCATCT
GCACTAGGAGTCTTGGGCACCAAAAGACTACCTTATCCAAGCAGATCATTTGAGTTGGCA
CATTGTTCACGTTGTAGAATTGATTGGCTCCAAAGAGACGGCATTCTTCTGTTGGAACTT
GACAGATTGCTCAGACCAGGTGGTTACTTTGTATACTCTTCACCTGAAGCTTATGCGCAT
GATGCTGAGAATCGAAGAATTTGGAATGCTATGTATGATCTACTTAGAAGAATGTGTTGG
AGAGTTGTTTCAAGGAGAGACCAAACTGTGATATGGGCTAAACCTCTGAGTAACAGCTGT
TATATGAAGAGAACTCCGGGGACCCAACCTCCCCTGTGCATGTCTGGTGATGAACCCGAT
GAAGCTTGGAACGTACCGATGAAGGCTTGCATCACTCTTTACTCACCAAAGGTGCATAAG
GAAAAAGGGACTGGACTATTACCTTGGCCAAAGAGGCTTACGGCTCCGCCACCTCGCTTG
GAGGAAATTGGTGTCACTTTGGAGGAATTCCATAAAGACACTAGCGTATGGCATGACAGA
GTGATTGACTATTGGAAGCAGATGAAGTCTCTTATCCAAAAGAACTCATTTAGGAATGTC
ATGGACATGAACTCAAACCTCGGTGGGTTTGCAGCTGCACTAAAGGATAAGGACATTTGG
GTGATGAACGTTGCTCCTCCTAACTTGTCATCAAGAATGAAAATAATATATGATCGAGGC
TTGATTGGAACAGTTCATGACTGGTGTGAGTCATTTTCAACGTACCCACGTACGTATGAC
CTACTTCATGCCTGGATGATTCTCTCGGAGACAGAAGAACGAGGCTGCAGTATTGAGGAT
CTGCTTATTGAGATGGACCGCATGCTACGGCCAGAAGGAGTTGTCATTATAAGAGATAAT
CCTCATATAATAAACTCTGTAAGAAAATTGTTGACTGCGCTAAAATGGGATGGATGGTCA
TCAGAGGTAGAACCACGGACCGATGCTCTCTCCTTGAGCGAAGAAAAAGTTTTAATCGCA
AGAAAGAAACTTTGGCAGGAGAAATTTACAATCTAA

Peptide Sequence

PEP ID

XP_016437444.1
PEP Infomation

PREDICTED: probable methyltransferase PMT9 isoform X2 [Nicotiana tabacum]
Sequence

MHVCDTRYSELIPCLDRNLIYQLRLRLNLTVMEHYERHCPPPQRRYNCLIPPPAGYKIPI
RWPASRDQVWKANIPHTHLAQEKSDQNWMVVDGDKIKFPGGGTHFHYGADKYIAAIAGML
KFPGEKLSNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPS
ALGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH
DAENRRIWNAMYDLLRRMCWRVVSRRDQTVIWAKPLSNSCYMKRTPGTQPPLCMSGDEPD
EAWNVPMKACITLYSPKVHKEKGTGLLPWPKRLTAPPPRLEEIGVTLEEFHKDTSVWHDR
VIDYWKQMKSLIQKNSFRNVMDMNSNLGGFAAALKDKDIWVMNVAPPNLSSRMKIIYDRG
LIGTVHDWCESFSTYPRTYDLLHAWMILSETEERGCSIEDLLIEMDRMLRPEGVVIIRDN
PHIINSVRKLLTALKWDGWSSEVEPRTDALSLSEEKVLIARKKLWQEKFTI

Transcript Sequence

Gene sequence data has not been registered.